Automatic Estimation of Number of Principal Components in PCA (pesel)
Automatic estimation of number of principal components in PCA with PEnalized SEmi-integrated Likelihood (PESEL). See Piotr Sobczyk, Malgorzata Bogdan, …

Fast Implementation of Dijkstra Algorithm (cppRouting)
Calculation of distances, shortest paths and isochrones on weighted graphs using several variants of Dijkstra algorithm. Proposed algorithms are unidir …

Robust P-Value Combination Methods (metapro)
The meta-analysis is performed to increase the statistical power by integrating the results from several experiments. The p-values are often combined i …

Estimation in Nonprobability Sampling (NonProbEst)
Different inference procedures are proposed in the literature to correct for selection bias that might be introduced with non-random selection mechanis …

Tidy Up Date/Time Ranges (neatRanges)
Collapse, partition, combine, fill gaps in and expand date/time ranges.

Selecting Matched Samples from Multiply Imputed Datasets (MatchIt.mice)
Selects matched samples from the control and treatment groups of each imputed datasets and estimates the weight of each individual in the complete dist …

Example Datasets for a Learning Guide to R (lgrdata)
A largish collection of example datasets, including several classics. Many of these datasets are well suited for regression, classification, and visual …

Simple Git Client (gert)
Minimal git client for R based on ‘libgit2’ <https://…/>. This package requires a somewha …

Bayesian Inference of Vector Autoregressive Models (bvartools)
Assists in the set-up of algorithms for Bayesian inference of vector autoregressive (VAR) models. Functions for posterior simulation, forecasting, impu …

Molecular Biology Visualization Tools for ‘Shiny’ Apps (shinyMolBio)
Interactive visualization of ‘RDML’ files via ‘shiny’ apps. Package provides (1) PCR plate interface with ability to select individual tubes and (2) am …

Advanced Plotting of Ordinal Regression Models (ormPlot)
An extension to the Regression Modeling Strategies package that facilitates plotting ordinal regression model predictions together with confidence inte …

Authentication Management for ‘Shiny’ Applications (shinymanager)
Simple and secure authentification mechanism for single ‘Shiny’ applications. Credentials are stored in an encrypted ‘SQLite’ database. Source code of …

Structural Equation Modeling for the Social Relations Model (srm)
Provides functionality for structural equation modeling for the social relations model (Warner, Kenny, & Soto, 1979, <doi:10.1037/0022-3514.37.1 …

Diverse Datasets for ‘tsibble’ (tsibbledata)
Provides diverse datasets in the ‘tsibble’ data structure. These datasets are useful for learning and demonstrating how tidy temporal data can tidied, …

Fuzzy Inference System Design and Optimization (FisPro)
Fuzzy inference systems are based on fuzzy rules, which have a good capability for managing progressive phenomenons. This package is a basic implementa …

Categorical Data Analysis (catfun)
Includes wrapper functions around existing functions for the analysis of categorical data and introduces functions for calculating risk differences and …

Selection Threshold Optimized Empirically via Splitting (STOPES)
A variable selection procedure for low to moderate size linear regressions models. This method repeatedly splits the data into two sets, one for estima …

Classes and Functions to Serve as the Basis for Other ‘Gx’ Packages (CoreGx)
A collection of functions and classes which serve as the foundation for our lab’s suite of R packages, such as ‘PharmacoGx’ and ‘RadioGx’. This package …

Graphical Elements of the University of Konstanz’s Corporate
Design (unikn)
Define and use graphical elements of corporate design manuals in R. The ‘unikn’ package provides color functions (by defining dedicated colors and colo …

Quality Assessment for Seasonal Adjustment (rjdqa)
Add-in to the ‘RJDemetra’ package on seasonal adjustments. It allows to produce quality assessments outputs (dashboards, quality report matrix, etc.).

A ‘Sparklyr’ Extension for ‘VariantSpark’ (variantspark)
This is a ‘sparklyr’ extension integrating ‘VariantSpark’ and R. ‘VariantSpark’ is a framework based on ‘scala’ and ‘spark’ to analyze genome datasets, …

Automated Backtesting of Portfolios over Multiple Datasets (portfolioBacktest)
Automated backtesting of multiple portfolios over multiple datasets of stock prices in a rolling-window fashion. Intended for researchers and practitio …

Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation (APFr)
Implements a multiple testing approach to the choice of a threshold gamma on the p-values using the Average Power Function (APF) and Bayes False Discov …

Create Custom ‘Rstudio’ Keyboard Shortcuts (rskey)
Create custom keyboard shortcuts to examine code selected in the ‘Rstudio’ editor. F3 can for example yield ‘str(selection)’ and F7 open the source cod …

The Flexible Spatial Scan Statistic (rflexscan)
Functions for the detection of spatial clusters using the flexible spatial scan statistic developed by Tango and Takahashi (2005) <doi:10.1186/1476- …

Roxygen’ to ‘Markdown’ (roxygen2md)
Converts elements of ‘roxygen’ documentation to ‘markdown’.

Mediation Analysis Using Joint Significance (JSmediation)
A set of helper functions to conduct joint-significance tests for mediation analysis, as recommended by Yzerbyt, Muller, Batailler, & Judd. (2018) …

Simplify Output Verbosity (quietR)
Simplifies output suppression logic in R packages, as it’s common to develop some form of it in R. ‘quietR’ intends to simplify that problem and allow …

Stan Models for the Pairwise Comparison Factor Model (pcFactorStan)
Provides convenience functions and pre-programmed Stan models related to the pairwise comparison factor model. Its purpose is to make fitting pairwise …

Spatial and Spatio-Temporal Bayesian Model for Circular Data (CircSpaceTime)
Implementation of Bayesian models for spatial and spatio-temporal interpolation of circular data using Gaussian Wrapped and Gaussian Projected distribu …

Complex Pearson Distributions (cpd)
Probability mass function, distribution function, quantile function and random generation for the Complex Triparametric Pearson (CTP) and Complex Bipar …

The Topic SCORE Algorithm to Fit Topic Models (TopicScore)
Provides implementation of the ‘Topic SCORE’ algorithm that is proposed by Tracy Ke and Minzhe Wang. The singular value decomposition step is optimized …

Implementation of SCORE, SCORE+ and Mixed-SCORE (ScorePlus)
Implementation of community detection algorithm SCORE in the paper J. Jin (2015) <arXiv:1211.5803>, and SCORE+ in J. Jin, Z. Ke and S. Luo (2018) …

Fitting Discrete Distribution Models to Count Data (scModels)
Provides functions for fitting discrete distribution models to count data. Included are the Poisson, the negative binomial and, most importantly, a new …

Interface to the ‘JWSACruncher’ of ‘JDemetra+’ (rjwsacruncher)
JDemetra+’ (<https://…/jdemetra-app> ) is the seasonal adjustment softw …

Creating Visuals for Publication (utile.visuals)
A small set of functions for making visuals for publication in ‘ggplot2’. Key functions include geom_stepconfint() for drawing a step confidence interv …

Composite Grid Gaussian Processes (CGGP)
Run computer experiments using the adaptive composite grid algorithm with a Gaussian process model. The algorithm works best when running an experiment …

Simple Jenkins Client (jenkins)
Manage jobs and builds on your Jenkins CI server <https://…/>. Create and edit projects, s …

Download and Load Various Text Datasets (textdata)
Provides a framework to download, parse, and store text datasets on the disk and load them when needed. Includes various sentiment lexicons and labeled …

Robust Backfitting (RBF)
A robust backfitting algorithm for additive models based on (robust) local polynomial kernel smoothers. It includes both bounded and re-descending (ker …